15:02:17 <RRSAgent> RRSAgent has joined #hcls
15:02:17 <RRSAgent> logging to http://www.w3.org/2017/06/06-hcls-irc
15:02:19 <trackbot> RRSAgent, make logs world
15:02:19 <Zakim> Zakim has joined #hcls
15:02:21 <trackbot> Zakim, this will be HCLS
15:02:21 <Zakim> ok, trackbot
15:02:22 <trackbot> Meeting: Semantic Web Health Care and Life Sciences Interest Group Teleconference
15:02:22 <trackbot> Date: 06 June 2017
15:04:36 <dbooth> Chair: David Booth
15:04:51 <dbooth> Topic: Example of connecting FHIR/RDF to external ontology
15:07:18 <dbooth> Present: EricP, David Booth, Gopi, Ken Lord
15:07:42 <dbooth> eric: Could connect to FMA, then ask questions like "is this a member of this class"?
15:11:27 <dbooth> gopi: Created a decision support ont in OWL.  Plan to go back and use FHIR RDF data.  Not annotating data with an external ont, but using another model with FHIR data.  But I have plans for SNOMED terms.
15:12:36 <dbooth> ken: Are you developing specific FHIR profiles based on FHIR resources?  Where do you capture the data for your instance of FHIR RDF?
15:12:53 <dbooth> gopi: Haven't started yet, but will be using FHIR Observations.
15:16:44 <dbooth> ... If there's a diagnostic criteria of pain on left side of face, but there is pain on the left cheek, then that should qualify.
15:16:57 <ericP> http://xiphoid.biostr.washington.edu/fma/fmabrowser-hierarchy.html?search=Arm&entryPoint=none&extendHierarchy=false
15:17:38 <ericP> http://build.fhir.org/observation-example-bloodpressure.ttl.html
15:19:19 <ericP> fhir:CodeableConcept.coding [ a fma:999 ]
15:19:19 <dbooth> eric: I pulled up the FMA identifier for upper arm.  If we look at that observation, and at body site (half way down the page), that's a right arm.  If I could get the FMA identifier out, I could say that it has an additional codeable concept body site
15:20:01 <dbooth> ... Then I would have upper arm.  I could then ask for BP measurements on this limb.
15:21:01 <dbooth> ken: Could use Gopi's example with that.
15:24:45 <ericP> http://build.fhir.org/observation-example-bmd.ttl.html 71341001:272741003=7771000 tumor density left femur
15:26:31 <dbooth> ACTION: Gopi to report on the progress of his work
15:26:31 <trackbot> Error finding 'Gopi'. You can review and register nicknames at <http://www.w3.org/2014/HCLS/track/users>.
15:27:57 <dbooth> ACTION: Eric to look at FHIR examples for potential use with FMA ontology
15:27:57 <trackbot> Created ACTION-87 - Look at fhir examples for potential use with fma ontology [on Eric Prud'hommeaux - due 2017-06-13].
15:30:22 <dbooth> Topic: Mini-ontology generation for status codes and other codes (Harold Solbrig)
15:30:31 <dbooth> ken: Is there an ont of status codes?
15:30:44 <dbooth> eric: Not sure.
15:31:41 <dbooth> dbooth: The point is to have more clarity about the relationships between status codes.
15:32:19 <dbooth> ... And formally capture them in ontology.
15:32:43 <dbooth> ... Rob Hausam is bringing that discuss back to the vocab group.
15:33:07 <dbooth> ken: If you group status codes (such as final) are there rules around that?
15:33:32 <dbooth> s/discuss/discussion/
15:34:07 <dbooth> eric: Yes, though we'd be unlikely to go outside of OWL.
15:34:16 <dbooth> Present+ Ken_Lord
15:34:23 <dbooth> ... So you cannot mix individuals and classes.
15:36:40 <dbooth> ADJOURNED
15:38:59 <dbooth> rrsagent, draft minutes
15:38:59 <RRSAgent> I have made the request to generate http://www.w3.org/2017/06/06-hcls-minutes.html dbooth
17:40:01 <Zakim> Zakim has left #hcls