IRC log of hcls on 2015-05-12

Timestamps are in UTC.

14:56:00 [RRSAgent]
RRSAgent has joined #hcls
14:56:00 [RRSAgent]
logging to http://www.w3.org/2015/05/12-hcls-irc
14:56:02 [trackbot]
RRSAgent, make logs world
14:56:02 [Zakim]
Zakim has joined #hcls
14:56:04 [trackbot]
Zakim, this will be HCLS
14:56:04 [Zakim]
ok, trackbot; I see SW_HCLS()11:00AM scheduled to start in 4 minutes
14:56:05 [trackbot]
Meeting: Semantic Web Health Care and Life Sciences Interest Group Teleconference
14:56:05 [trackbot]
Date: 12 May 2015
14:56:22 [Zakim]
SW_HCLS()11:00AM has now started
14:56:29 [Zakim]
+DBooth
15:00:33 [Tony]
Tony has joined #HCLS
15:01:24 [Zakim]
+Tony
15:02:30 [mscottm]
mscottm has joined #hcls
15:03:50 [dbooth]
agenda: http://wiki.hl7.org/index.php?title=ITS_RDF_ConCall_Agenda
15:04:04 [Zakim]
+mscottm
15:05:32 [dbooth]
page is 404: http://wiki.hl7.org/images/1/19/FHIR_RDF_Sample_side_by_side_comparisons_v2.pdf
15:06:56 [Marc_Twagirumukiza]
Marc_Twagirumukiza has joined #HCLS
15:07:10 [Zakim]
+Marc_Twagirumukiza
15:07:39 [dbooth]
http://wiki.hl7.org/index.php?title=File:FHIR_RDF_Sample_side_by_side_comparisons.pdf
15:07:47 [dbooth]
Topic: Blank nodes
15:15:24 [dbooth]
1. @prefix loinc: <http://loinc.org/owl#> .
15:15:24 [dbooth]
2. :resource a fhir:Observation;
15:15:24 [dbooth]
3. fhir:Observation.code [
15:15:24 [dbooth]
4. fhir:CodeableConcept.coding [
15:15:25 [dbooth]
5. fhir:Coding.system <http://loinc.org>;
15:15:25 [dbooth]
6. fhir:Coding.code "54411-4";
15:15:27 [dbooth]
7. fhir:Coding.display "Rh immune globulin given Qualitative";
15:15:29 [dbooth]
8. ex:concept loinc:54411-4;
15:15:31 [dbooth]
9. ];
15:15:33 [dbooth]
10. fhir:CodeableConcept.text "Rh immune globulin";
15:15:35 [dbooth]
11. ].
15:24:19 [Zakim]
+ericP
15:29:08 [Zakim]
+EricP
15:29:18 [Zakim]
-ericP
15:30:28 [Rafael_Richards]
Rafael_Richards has joined #HCLS
15:30:52 [dbooth]
eric: Michel Dumontier can help on this blank node question.
15:31:11 [Zakim]
+[IPcaller]
15:33:58 [Marc_Twagirumukiza]
At RDF level normally it's ok to use BN but in Protege it's a problem because it support poorly turtle
15:35:03 [dbooth]
ACTION: Tony and David to get blank node example ready and send to Michel Dumontier
15:35:03 [trackbot]
Error finding 'Tony'. You can review and register nicknames at <http://www.w3.org/2014/HCLS/track/users>.
15:37:13 [dbooth]
Topic: Side-by-side comparison
15:37:14 [dbooth]
http://wiki.hl7.org/images/2/25/FHIR_RDF_Sample_side_by_side_comparisons.pdf
15:38:51 [Zakim]
-[IPcaller]
15:39:46 [dbooth]
zakim, who is making noise?
15:39:56 [Zakim]
dbooth, listening for 10 seconds I heard sound from the following: DBooth (43%), Tony (38%), EricP (27%)
15:43:07 [Zakim]
-Marc_Twagirumukiza
15:43:36 [Zakim]
+Marc_Twagirumukiza
15:44:28 [mscottm_]
mscottm_ has joined #hcls
15:44:44 [Zakim]
-Marc_Twagirumukiza
15:47:38 [dbooth]
<AllergyIntolerance xmlns="http://hl7.org/fhir">
15:47:38 [dbooth]
<status value="confirmed"/>
15:47:38 [dbooth]
</AllergyIntolerance>
15:54:11 [dbooth]
eric: treating "confirmed" as a class instead of an instance may take more reasoning time, but it's an available mechanism
15:54:57 [dbooth]
tony: it's like "red", there are things that are red, but red itself isn't an entity.
15:58:11 [dbooth]
1. allergy:AllergyIntolerance.status [ rdf:type fhir:Code ,
15:58:11 [dbooth]
2. <http://hl7.org/fhir/allergyIntoleranceStatus/confirmed> ;
15:58:11 [dbooth]
3. fhir:value "confirmed"
15:58:11 [dbooth]
4. ] ;
16:07:29 [dbooth]
dbooth: Key question is can we infer line 2 from line 3 and the ontology?
16:07:47 [dbooth]
tony: No, because of the blank node.
16:11:36 [dbooth]
eric: need to separate what we know based on the ontologies from what we know only from the instance data.
16:13:09 [Zakim]
-EricP
16:13:16 [Zakim]
-mscottm
16:14:29 [dbooth]
dbooth: Need to show example including: (a) FHIR XML instance data; (b) corresponding FHIR RDF instance date prior to inference; (c) corresponding FHIR RDF instance date after inference; and (d) the ontology that enables that inference.
16:15:05 [dbooth]
ADJOURNED
16:25:40 [Zakim]
-Tony
16:25:41 [Zakim]
-DBooth
16:25:43 [Zakim]
SW_HCLS()11:00AM has ended
16:25:43 [Zakim]
Attendees were DBooth, Tony, mscottm, Marc_Twagirumukiza, ericP, [IPcaller]
16:25:57 [dbooth]
Chair: David Booth
16:26:05 [dbooth]
rrsagent, draft minutes
16:26:05 [RRSAgent]
I have made the request to generate http://www.w3.org/2015/05/12-hcls-minutes.html dbooth
16:27:41 [dbooth]
Present: DBooth, Tony, mscottm, Marc_Twagirumukiza, ericP
16:27:51 [dbooth]
rrsagent, draft minutes
16:27:51 [RRSAgent]
I have made the request to generate http://www.w3.org/2015/05/12-hcls-minutes.html dbooth
17:23:45 [dbooth]
dbooth has joined #hcls
17:24:05 [dbooth]
trackbot, bye
17:24:05 [trackbot]
trackbot has left #hcls
17:24:08 [Tony]
Tony has joined #HCLS
17:24:11 [dbooth]
rrsagent, bye
17:24:11 [RRSAgent]
I see 1 open action item saved in http://www.w3.org/2015/05/12-hcls-actions.rdf :
17:24:11 [RRSAgent]
ACTION: Tony and David to get blank node example ready and send to Michel Dumontier [1]
17:24:11 [RRSAgent]
recorded in http://www.w3.org/2015/05/12-hcls-irc#T15-35-03