15:56:39 <RRSAgent> RRSAgent has joined #hcls
15:56:40 <RRSAgent> logging to http://www.w3.org/2007/03/08-hcls-irc
15:57:12 <eneumann> rrsagent, set log world-visible
15:59:07 <Don> Don has joined #hcls
16:03:19 <eneumann> zakim, this is hcls
16:03:20 <Zakim> ok, eneumann; that matches SW_HCLS()11:00AM
16:03:26 <eneumann> zakim, who is here?
16:03:26 <Zakim> On the phone I see Don_Doherty, John_Barkley, eneumann, Susie, Davide_Zaccagnini
16:03:28 <Susie> Susie has joined #hcls
16:03:28 <Zakim> On IRC I see Don, RRSAgent, Zakim, eneumann, ericP
16:03:58 <helen> helen has joined #hcls
16:04:07 <Zakim> +Olivier_Bodenreider
16:04:20 <Davide> Davide has joined #hcls
16:04:36 <Zakim> +Tanya_Hongsermeier
16:05:41 <Zakim> +[Agfa]
16:06:02 <eneumann> zakim, [Agfa] is helen 
16:06:02 <Zakim> +helen; got it
16:06:13 <Zakim> + +1.617.253.aaaa
16:07:01 <Tonya> Tonya has joined #hcls
16:07:19 <alanr> alanr has joined #hcls
16:09:11 <eneumann> zakim, aaaa is alanr
16:09:11 <Zakim> +alanr; got it
16:10:13 <eneumann> zakim, pick a victim
16:10:13 <Zakim> Not knowing who is chairing or who scribed recently, I propose Don_Doherty
16:10:38 <eneumann> scribe is Don_Doherty
16:11:54 <Don> [EN] Alan give a quick summary of F2F
16:12:18 <eneumann> zakim, scribe is Don_Doherty
16:12:18 <Zakim> sorry, eneumann, I do not recognize a party named 'scribe'
16:12:40 <Don> [AR] Start on getting ortholog info
16:12:40 <Zakim> +[IPcaller]
16:13:13 <Don> [AR] Work on disease annotations (MeSH, MGD) rat and human
16:13:45 <Don> [AR] Talk with Bill Bug and Mariane Maritone ...OWL version of brain atlas
16:13:50 <samwaldmatthias> samwaldmatthias has joined #hcls
16:13:55 <eneumann> scribe is Don
16:14:03 <Don> [AR] Cell line ontology contact
16:14:28 <Don> [AR] Models for Allen Brain Atlas triples
16:14:55 <eneumann> Scribe is Don
16:15:02 <Don> [AR] First model a couple of examples...John B. volunteers
16:15:11 <eneumann> scribe: Don
16:15:52 <Susie> q+
16:16:26 <eneumann> zakim, IPcaller is samwaldmatthias
16:16:26 <Zakim> +samwaldmatthias; got it
16:16:53 <Don> [AR] probably focus on mouse and human
16:17:26 <eneumann> http://lists.w3.org/Archives/Public/public-semweb-lifesci/2007Mar/0056.html
16:17:29 <Don> [AR] carefully distinguish data from things in the world
16:17:42 <eneumann> ack Susie
16:21:30 <Don> [EN] Action: Data conversion team will convene over telephone this week
16:21:32 <eneumann> Action: Demo data team to have TC/meeting this monday for deciding data conversion sets
16:22:57 <eneumann> data team is: AlanR, John Barkely, Matthias S, Susie S, Don D, possibly Gwen and Marko
16:23:12 <Don> [AR] Need to get Oracle up and running on a virtual machine
16:26:01 <Don> [EN] could we use XSLT?
16:26:47 <eneumann> Action: identify PubChem subset for demo 
16:27:08 <Don> [AR] Identify subset for demo, if subset looks useful select method for conversion
16:27:40 <alanr> http://sw.neurocommons.org/2007/annotations.owl
16:27:46 <alanr> http://sw.neurocommons.org/2007/aba.owl
16:28:18 <Don> [AR] Annotatins for Allan Brain Atlas
16:29:00 <alanr> and NLP
16:30:14 <Zakim> +[MIT528]
16:30:25 <ericP> Zakim, MIT528 is me
16:30:25 <Zakim> +ericP; got it
16:32:35 <Don> [HC] Considered a demo matching synonyms across databases?
16:33:24 <Don> [AR] gene "is identified by" may be multiply valued
16:34:07 <Don> [AR] orthology information my help...based on triple store ...not synonyms
16:35:16 <Don> [AR] uses SameAs and inference
16:38:10 <Don> [HC] add layer of mapping that makes the connections
16:38:10 <ericP> interesting, sounds like it could be a query premise
16:39:07 <Don> [EN] Help with the UI?
16:39:21 <Don> [AR] extend the Google maps interface
16:40:05 <Don> [AR] save annotions to triple store
16:41:42 <alanr> http://prefuse.org/gallery/
16:42:21 <eneumann> http://simile.mit.edu/exhibit
16:42:36 <samwaldmatthias> http://lists.w3.org/Archives/Public/public-semweb-lifesci/2007Jan/0229.html
16:42:43 <Don> Perfuse is thick client...Simile is thin client
16:42:57 <samwaldmatthias> screenshots i made of ontowiki: http://neuroscientific.net/res/ontowiki-screenshots/
16:43:13 <Don> Ontowiki is also thin client...right?
16:44:40 <Don> Is it important if the demo is browser based or not?
16:44:56 <alanr> e.g http://prefuse.org/gallery/fisheyemenu/
16:45:10 <Don> [EN] Action: Looking at UI...Mattais
16:47:29 <Zakim> -Olivier_Bodenreider
16:48:22 <Don> [EN] Anyone look at Perfuse as a possible UI
16:48:27 <eneumann> Action: Matthias to see potential uses of Ontowiki UI, EricN on Exhibit 
16:49:56 <Don> [AR] Help form what the demo will look like
16:50:19 <Don> [EN] Be creative and innovative with the UI
16:51:08 <Don> [AR] Network visualization...the reason graphs haven't been useful is due to very literal RDF to graph translations
16:51:35 <Don> [AR] among enties what info would you like visualized?
16:52:36 <Don> [EN] Meeting Monday on data and UI
16:54:00 <helen> Alan, if your case requires using some rules for your mapping, I am happy to help
16:54:24 <Zakim> -Susie
16:54:25 <Zakim> -Tanya_Hongsermeier
16:54:27 <Zakim> -Davide_Zaccagnini
16:54:28 <Zakim> -alanr
16:54:28 <Zakim> -helen
16:54:33 <Zakim> -John_Barkley
16:54:37 <Zakim> -samwaldmatthias
16:54:56 <eneumann> rrsagent, draft minutes
16:54:56 <RRSAgent> I have made the request to generate http://www.w3.org/2007/03/08-hcls-minutes.html eneumann
16:55:23 <eneumann> rrsagent, bye
16:55:23 <RRSAgent> I see 3 open action items saved in http://www.w3.org/2007/03/08-hcls-actions.rdf :
16:55:23 <RRSAgent> ACTION: Demo data team to have TC/meeting this monday for deciding data conversion sets [1]
16:55:23 <RRSAgent>   recorded in http://www.w3.org/2007/03/08-hcls-irc#T16-21-32
16:55:23 <RRSAgent> ACTION: identify PubChem subset for demo  [2]
16:55:23 <RRSAgent>   recorded in http://www.w3.org/2007/03/08-hcls-irc#T16-26-47
16:55:23 <RRSAgent> ACTION: Matthias to see potential uses of Ontowiki UI, EricN on Exhibit  [3]
16:55:23 <RRSAgent>   recorded in http://www.w3.org/2007/03/08-hcls-irc#T16-48-27